I am a bioinformatics software engineer.
I build



Recent Talks More »

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Using WebAssembly to speed up genomics web tools

CSHL BIODATA 2018
Cold Spring Harbor, NY
November 8, 2018

How to use Bash as a full-fledged programming language

O'Reilly OSCON 2018
Portland, OR
July 17, 2018

Build scalable genomics apps on the cloud

Bay Bioinformatics Meetup
South San Francisco, CA
May 11, 2018



Recent Projects More »

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Aioli

Framework for building fast genomics web tools with WebAssembly and WebWorkers

fastq.bio

Web app to QC sequencing data

Adventures in Data Science with Bash

A book introducing data science on the command line



Recent Articles More »

Move Fast and
Break the Cloud

A Benchmark of VM Boot Times on GCP

A Tale of Two Clouds: Amazon vs. Google

An in-depth comparison of AWS and Google Cloud features and offerings

The Weird, Wondrous World of Bash Arrays

How Bash arrays can change your life